humann

humann/3.8: HUMAnN (HMP Unified Metabolic Analysis Network) is a pipeline for efficiently and accurately profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data (typically millions of short DNA/RNA reads). HUMAnN 3.0 is the next generation of HUMAnN

Link to homepage: https://github.com/biobakery/humann