Available modules

A-B-C-D-E-F-G-H-I-J-K-L-M-N-O-P-Q-R-S-T-U-V-W-X-Z

A

ABC
adapterremoval
AF_Cluster
alphapept
alphapulldown
AlphaPulldownSnakemake
AmpliconArchitect
AmpliconClassifier
anaconda2
anaconda3
anvio
arboreto
arrayfire
atlas
atsas
autoconf
automake
awscli

B

basespace
baysor
bcftools
bcftools-libdeflate
bcl2fastq
bcl-convert
bedops
bedtools
bexy
bgen
binutils
biopython
bismark
blender
blush
BOLT-LMM
boost
bowtie2
bowtie
bwa
bwa-mem2

C

cabextract
ccp4
ccpem
ccpnmr
cd-hit
cellassign
cellbender
cellect
cellex
cellranger-arc
cellranger-atac
cellranger
cellrank
cellsnp-lite
chimera
chimerax
cistem
cmake
cnvkit
concoct
cryodrgn
ctffind
cuda
cudnn
curl
cutadapt

D

deeptools
depict
diann
django
dorado
dotNET

E

easybuild
eautils
eigen
emacs
eman2
emready
epacts

F

f5c
fastp
fastqc
feems
feh
fftw
fgwas
fiji
fltk
fontconfig
fraposa-pgsc
freetype
fribidi
futhark

G

gargammel
gatk
gcc
gcta
gctf
gdal
gemma
geneformer
genozip
geos
getblunted
gffcompare
ghostscript
giggle
git
glfw
globusconnectpersonal
glpk
gmp
gnuplot
gocommand
google-api-python-client
GPRPy
gpustat
grace
groff
gromacs
gsl
gsutil

H

hail
harfbuzz
hdf5
hh-suite
hmmer
homer
HTSeq
htslib
humann
hwloc

I

igzip
imlabtools
imlib2
imod
intervaltree
ispc

J

jags
jdk
jemalloc
jq
julia
jupyter-notebook

K

kalign
kallisto
king
kneaddata

L

lapack
ldsc
libdeflate
libffi
libjpeg
libpng
libtool
libuv
libxkbcommon
libxml2
libxscrnsaver
lightgbm
llvm
lofreq
ltr-retriever
lynx

M

M4
macs
mageck
mamba
matlab
matplotlib
maxquant
MaxQuant
mega
mesa
meson
metal
metaphlan
metaxcan
micromamba
microsoft-fonts
miller
miniconda
minimap2
mlkit
mlton
model_angelo
modeller
modkit
motioncor2
motioncor3
mpfr
MSFragger
mtag
multiqc

N

nasm
ncftp
neovim
netcdf-c
netcdf-fortran
nextflow
ngsadmix
ninja
nlopt
nmrpipe
nmr-relax
nodejs
numpy

O

oneTBB
openblas
openjdk
openmm
openmpi
openssl

P

p7zip
pandas
parallel
patch
perl
pgscatalog-utils
phageboost
phanta
phenix
picard
pigz
pleio
plink
plumed
proj
proteinmpnn
prsice
pycharm
pyem
pymol
pyro-ppl
pyrosetta
pytables
python2
python
pytorch

Q

qctool
qpdf
quarto
quicktest

R

rclone
R-devel
refgenie
regenie
relax
relion
reliosparc
repeatmodeler
RFAA
R
rmath
roadies
roadies-utils
rocm
rosettafold-all-atom
rust
rvtests

S

salmon
samtools
samtools-libdeflate
sas
scHLAcount
scikit-learn
scipion
scsa
seaborn
seaview
seqtk
shellcheck
sickle
sidesplitter
signalp
sigtk
singularity
slow5lib
slow5tools
smr
smrivw
smrtlink-tools
snakemake
snakemake-slurm-profile
sniffles
snptest
sqlite3
squeezemeta
squigualiser
squigulator
sratoolkit
star
stow
stream
subread
swig

T

tcsh
tensorflow
tetranscripts
texlive
tiff
topspin
torchaudio
torchvision
trf
trimgalore
trimmomatic
trnascan-se

U

udocker
udunits2
umol-deps
umol
unison
upcxx
usage_script

V

valgrind
vcflib
vcftools
velocyto
vg

W

wxWidgets

X

xgboost

Z

zlib
zsh